Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_1549 | VF_2300 | VF_1549 | VF_2300 | Thiol:disulfide interchange protein TlpA. | Glutaredoxin. | 0.881 |
VF_1549 | VF_2494 | VF_1549 | VF_2494 | Thiol:disulfide interchange protein TlpA. | Thiol:disulfide interchange protein DsbD. | 0.835 |
VF_1549 | msrA | VF_1549 | VF_0331 | Thiol:disulfide interchange protein TlpA. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.798 |
VF_1549 | msrA-2 | VF_1549 | VF_A0005 | Thiol:disulfide interchange protein TlpA. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.977 |
VF_2300 | VF_1549 | VF_2300 | VF_1549 | Glutaredoxin. | Thiol:disulfide interchange protein TlpA. | 0.881 |
VF_2300 | ccmG | VF_2300 | VF_1818 | Glutaredoxin. | Periplasmic thioredoxin of cytochrome c-type biogenesis. | 0.881 |
VF_2300 | msrA | VF_2300 | VF_0331 | Glutaredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.584 |
VF_2300 | msrA-2 | VF_2300 | VF_A0005 | Glutaredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.739 |
VF_2494 | VF_1549 | VF_2494 | VF_1549 | Thiol:disulfide interchange protein DsbD. | Thiol:disulfide interchange protein TlpA. | 0.835 |
VF_2494 | ccmG | VF_2494 | VF_1818 | Thiol:disulfide interchange protein DsbD. | Periplasmic thioredoxin of cytochrome c-type biogenesis. | 0.835 |
VF_2494 | msrA | VF_2494 | VF_0331 | Thiol:disulfide interchange protein DsbD. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.593 |
VF_2494 | msrA-2 | VF_2494 | VF_A0005 | Thiol:disulfide interchange protein DsbD. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.977 |
VF_2494 | msrB | VF_2494 | VF_0914 | Thiol:disulfide interchange protein DsbD. | Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family. | 0.614 |
ccmG | VF_2300 | VF_1818 | VF_2300 | Periplasmic thioredoxin of cytochrome c-type biogenesis. | Glutaredoxin. | 0.881 |
ccmG | VF_2494 | VF_1818 | VF_2494 | Periplasmic thioredoxin of cytochrome c-type biogenesis. | Thiol:disulfide interchange protein DsbD. | 0.835 |
ccmG | msrA | VF_1818 | VF_0331 | Periplasmic thioredoxin of cytochrome c-type biogenesis. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.798 |
ccmG | msrA-2 | VF_1818 | VF_A0005 | Periplasmic thioredoxin of cytochrome c-type biogenesis. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.977 |
msrA | VF_1549 | VF_0331 | VF_1549 | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Thiol:disulfide interchange protein TlpA. | 0.798 |
msrA | VF_2300 | VF_0331 | VF_2300 | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Glutaredoxin. | 0.584 |
msrA | VF_2494 | VF_0331 | VF_2494 | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Thiol:disulfide interchange protein DsbD. | 0.593 |
page 1 of 3