Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_A0396 | VF_A0530 | VF_A0396 | VF_A0530 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine phosphorylase. | 0.900 |
VF_A0396 | cdd | VF_A0396 | VF_1485 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 0.906 |
VF_A0396 | deoA | VF_A0396 | VF_0505 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.922 |
VF_A0396 | surE | VF_A0396 | VF_2070 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Broad specificity 5'(3')-nucleotidase and polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.911 |
VF_A0396 | tdk | VF_A0396 | VF_1599 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase/deoxyuridine kinase. | 0.901 |
VF_A0396 | udp | VF_A0396 | VF_1521 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.900 |
VF_A0396 | upp | VF_A0396 | VF_1927 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.900 |
VF_A0396 | ushA | VF_A0396 | VF_0778 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Bifunctional UDP-sugar hydrolase/5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.928 |
VF_A0530 | VF_A0396 | VF_A0530 | VF_A0396 | Uridine phosphorylase. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.900 |
VF_A0530 | cdd | VF_A0530 | VF_1485 | Uridine phosphorylase. | Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 0.965 |
VF_A0530 | deoA | VF_A0530 | VF_0505 | Uridine phosphorylase. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.949 |
VF_A0530 | deoB | VF_A0530 | VF_0506 | Uridine phosphorylase. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.598 |
VF_A0530 | surE | VF_A0530 | VF_2070 | Uridine phosphorylase. | Broad specificity 5'(3')-nucleotidase and polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.901 |
VF_A0530 | tdk | VF_A0530 | VF_1599 | Uridine phosphorylase. | Thymidine kinase/deoxyuridine kinase. | 0.911 |
VF_A0530 | udp | VF_A0530 | VF_1521 | Uridine phosphorylase. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.919 |
VF_A0530 | upp | VF_A0530 | VF_1927 | Uridine phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.914 |
VF_A0530 | ushA | VF_A0530 | VF_0778 | Uridine phosphorylase. | Bifunctional UDP-sugar hydrolase/5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.900 |
cdd | VF_A0396 | VF_1485 | VF_A0396 | Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.906 |
cdd | VF_A0530 | VF_1485 | VF_A0530 | Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | Uridine phosphorylase. | 0.965 |
cdd | deoA | VF_1485 | VF_0505 | Cytidine/deoxycytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.967 |
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