ygdD protein (Aliivibrio fischeri) - STRING interaction network

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ygdD

Conserved inner membrane protein. (128 aa)

Predicted Functional Partners:

ygdE

0.938

gcvA

0.853

yqjF

0.765

pykF

0.755

rbsR

0.676

csdE

0.497

sdhB

0.428

frdB

0.428

Your Current Organism:

Aliivibrio fischeri

NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
csdE	ygdD	VF_0589	VF_0592	Predicted Fe-S metabolism protein.	Conserved inner membrane protein.	0.497
csdE	ygdE	VF_0589	VF_0593	Predicted Fe-S metabolism protein.	Predicted methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.	0.587
frdB	sdhB	VF_2335	VF_0822	Fumarate reductase (anaerobic), Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	Succinate dehydrogenase, Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.915
frdB	ygdD	VF_2335	VF_0592	Fumarate reductase (anaerobic), Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	Conserved inner membrane protein.	0.428
gcvA	ygdD	VF_0591	VF_0592	DNA-binding transcriptional dual regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.	Conserved inner membrane protein.	0.853
gcvA	ygdE	VF_0591	VF_0593	DNA-binding transcriptional dual regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.	Predicted methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.	0.849
pykF	rbsR	VF_2258	VF_1449	Pyruvate kinase I; Belongs to the pyruvate kinase family.	Transcriptional repressor RbsR, LacI family.	0.538
pykF	ygdD	VF_2258	VF_0592	Pyruvate kinase I; Belongs to the pyruvate kinase family.	Conserved inner membrane protein.	0.755
pykF	yqjF	VF_2258	VF_1067	Pyruvate kinase I; Belongs to the pyruvate kinase family.	Predicted quinol oxidase subunit.	0.742
rbsR	pykF	VF_1449	VF_2258	Transcriptional repressor RbsR, LacI family.	Pyruvate kinase I; Belongs to the pyruvate kinase family.	0.538
rbsR	ygdD	VF_1449	VF_0592	Transcriptional repressor RbsR, LacI family.	Conserved inner membrane protein.	0.676
rbsR	yqjF	VF_1449	VF_1067	Transcriptional repressor RbsR, LacI family.	Predicted quinol oxidase subunit.	0.500
sdhB	frdB	VF_0822	VF_2335	Succinate dehydrogenase, Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	Fumarate reductase (anaerobic), Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.915
sdhB	ygdD	VF_0822	VF_0592	Succinate dehydrogenase, Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	Conserved inner membrane protein.	0.428
ygdD	csdE	VF_0592	VF_0589	Conserved inner membrane protein.	Predicted Fe-S metabolism protein.	0.497
ygdD	frdB	VF_0592	VF_2335	Conserved inner membrane protein.	Fumarate reductase (anaerobic), Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.428
ygdD	gcvA	VF_0592	VF_0591	Conserved inner membrane protein.	DNA-binding transcriptional dual regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.	0.853
ygdD	pykF	VF_0592	VF_2258	Conserved inner membrane protein.	Pyruvate kinase I; Belongs to the pyruvate kinase family.	0.755
ygdD	rbsR	VF_0592	VF_1449	Conserved inner membrane protein.	Transcriptional repressor RbsR, LacI family.	0.676
ygdD	sdhB	VF_0592	VF_0822	Conserved inner membrane protein.	Succinate dehydrogenase, Fe-S subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.428

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