STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proWGlycine betaine transporter subunit. (360 aa)    
Predicted Functional Partners:
proX
Glycine betaine transporter subunit.
 
 0.999
proV
Glycine betaine transporter subunit.
 
 0.999
VF_A1050
Glycine betaine-binding protein.
 
 
 0.989
malF2
Maltose transport system permease protein MalF.
     
 0.552
malF
Maltose transport system permease protein MalF.
     
 0.552
malK2
Maltose/maltodextrin transport ATP-binding protein MalK2; Belongs to the ABC transporter superfamily.
     
 0.541
malK
Fused maltose transport subunit, ATP-binding component of ABC superfamily/regulatory protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.
     
 0.541
yjgP
Conserved inner membrane protein.
     
  0.540
yjgQ
Conserved inner membrane protein.
     
  0.540
VF_1565
Cobalt transport ATP-binding protein CbiO.
     
  0.540
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.