STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrBMultidrug efflux system protein; Belongs to the major facilitator superfamily. (533 aa)    
Predicted Functional Partners:
emrK
EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component.
 
 
 0.975
VF_A1103
Multidrug resistance protein A.
 
 
 0.894
emrD
Multidrug efflux system protein.
  
   
 0.841
VF_A0896
Multidrug resistance protein A.
 
 
 0.768
VF_A0743
Multidrug resistance protein A.
 
 
 0.736
rsuA
16S rRNA pseudouridylate 516 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.568
tolC
Transport channel.
  
  
 0.567
yiaV
Membrane fusion protein (MFP) component of efflux pump, signal anchor.
 
 
 0.558
VF_0877
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.531
bcr
Bicyclomycin/multidrug efflux system.
 
   
 0.498
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.