Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_0327 | VF_1105 | VF_0327 | VF_1105 | ABC transporter ATP-binding protein. | Transporter. | 0.630 |
VF_0327 | VF_1106 | VF_0327 | VF_1106 | ABC transporter ATP-binding protein. | ABC transporter permease. | 0.630 |
VF_0327 | lolA | VF_0327 | VF_0906 | ABC transporter ATP-binding protein. | Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.760 |
VF_0884 | VF_1105 | VF_0884 | VF_1105 | ABC transporter ATP-binding protein. | Transporter. | 0.630 |
VF_0884 | VF_1106 | VF_0884 | VF_1106 | ABC transporter ATP-binding protein. | ABC transporter permease. | 0.680 |
VF_0884 | lolA | VF_0884 | VF_0906 | ABC transporter ATP-binding protein. | Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.760 |
VF_1104 | VF_1105 | VF_1104 | VF_1105 | Hypothetical protein. | Transporter. | 0.958 |
VF_1104 | VF_1106 | VF_1104 | VF_1106 | Hypothetical protein. | ABC transporter permease. | 0.960 |
VF_1104 | VF_1107 | VF_1104 | VF_1107 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.904 |
VF_1104 | VF_1109 | VF_1104 | VF_1109 | Hypothetical protein. | Hypothetical protein. | 0.875 |
VF_1105 | VF_0327 | VF_1105 | VF_0327 | Transporter. | ABC transporter ATP-binding protein. | 0.630 |
VF_1105 | VF_0884 | VF_1105 | VF_0884 | Transporter. | ABC transporter ATP-binding protein. | 0.630 |
VF_1105 | VF_1104 | VF_1105 | VF_1104 | Transporter. | Hypothetical protein. | 0.958 |
VF_1105 | VF_1106 | VF_1105 | VF_1106 | Transporter. | ABC transporter permease. | 0.843 |
VF_1105 | VF_1107 | VF_1105 | VF_1107 | Transporter. | ABC transporter ATP-binding protein. | 0.951 |
VF_1105 | VF_1109 | VF_1105 | VF_1109 | Transporter. | Hypothetical protein. | 0.868 |
VF_1105 | VF_A0737 | VF_1105 | VF_A0737 | Transporter. | ABC transporter ATP-binding protein. | 0.594 |
VF_1105 | lolA | VF_1105 | VF_0906 | Transporter. | Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.634 |
VF_1105 | lolD | VF_1105 | VF_A0463 | Transporter. | Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.650 |
VF_1105 | macB | VF_1105 | VF_1165 | Transporter. | Fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component. | 0.594 |
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