Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_0324 | VF_0527 | VF_0324 | VF_0527 | Hypothetical protein. | Hypothetical protein. | 0.774 |
VF_0324 | VF_1491 | VF_0324 | VF_1491 | Hypothetical protein. | ATPase involved in DNA repair. | 0.774 |
VF_0324 | VF_1883 | VF_0324 | VF_1883 | Hypothetical protein. | Conserved hypothetical protein. | 0.700 |
VF_0324 | VF_1884 | VF_0324 | VF_1884 | Hypothetical protein. | Conserved hypothetical protein. | 0.767 |
VF_0324 | VF_1885 | VF_0324 | VF_1885 | Hypothetical protein. | Conserved hypothetical protein. | 0.745 |
VF_0324 | VF_A0461 | VF_0324 | VF_A0461 | Hypothetical protein. | Hypothetical protein. | 0.774 |
VF_0324 | cheX | VF_0324 | VF_0305 | Hypothetical protein. | Chemotaxis CheY-phosphatase CheX. | 0.466 |
VF_0324 | fliL1 | VF_0324 | VF_1846 | Hypothetical protein. | Flagellar basal body-associated protein FliL1; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.613 |
VF_0324 | fliL2 | VF_0324 | VF_2446 | Hypothetical protein. | Flagellar basal body-associated protein FliL2; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.661 |
VF_0324 | motX | VF_0324 | VF_2317 | Hypothetical protein. | Flagellar motor protein MotX. | 0.772 |
VF_0527 | VF_0324 | VF_0527 | VF_0324 | Hypothetical protein. | Hypothetical protein. | 0.774 |
VF_0527 | VF_1491 | VF_0527 | VF_1491 | Hypothetical protein. | ATPase involved in DNA repair. | 0.774 |
VF_0527 | VF_1883 | VF_0527 | VF_1883 | Hypothetical protein. | Conserved hypothetical protein. | 0.729 |
VF_0527 | VF_1884 | VF_0527 | VF_1884 | Hypothetical protein. | Conserved hypothetical protein. | 0.771 |
VF_0527 | VF_1885 | VF_0527 | VF_1885 | Hypothetical protein. | Conserved hypothetical protein. | 0.764 |
VF_0527 | VF_A0461 | VF_0527 | VF_A0461 | Hypothetical protein. | Hypothetical protein. | 0.774 |
VF_0527 | cheX | VF_0527 | VF_0305 | Hypothetical protein. | Chemotaxis CheY-phosphatase CheX. | 0.623 |
VF_0527 | fliL1 | VF_0527 | VF_1846 | Hypothetical protein. | Flagellar basal body-associated protein FliL1; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.654 |
VF_0527 | fliL2 | VF_0527 | VF_2446 | Hypothetical protein. | Flagellar basal body-associated protein FliL2; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.663 |
VF_0527 | motX | VF_0527 | VF_2317 | Hypothetical protein. | Flagellar motor protein MotX. | 0.774 |
page 1 of 6