Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VF_1549 | ccmA | VF_1549 | VF_1824 | Thiol:disulfide interchange protein TlpA. | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.748 |
| VF_1549 | ccmB | VF_1549 | VF_1823 | Thiol:disulfide interchange protein TlpA. | Heme exporter subunit B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.812 |
| VF_1549 | ccmC | VF_1549 | VF_1822 | Thiol:disulfide interchange protein TlpA. | Heme exporter subunit C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.887 |
| VF_1549 | ccmE | VF_1549 | VF_1820 | Thiol:disulfide interchange protein TlpA. | Periplasmic heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.872 |
| VF_1549 | ccmH | VF_1549 | VF_1817 | Thiol:disulfide interchange protein TlpA. | Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase. | 0.855 |
| VF_1549 | ccmI | VF_1549 | VF_1816 | Thiol:disulfide interchange protein TlpA. | Cytochrome c-type biogenesis protein CcmI. | 0.812 |
| VF_1549 | nrfD | VF_1549 | VF_1551 | Thiol:disulfide interchange protein TlpA. | Formate-dependent nitrite reductase, membrane subunit. | 0.641 |
| VF_1549 | nrfE | VF_1549 | VF_1550 | Thiol:disulfide interchange protein TlpA. | Heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE. | 0.979 |
| VF_1549 | nrfF | VF_1549 | VF_1548 | Thiol:disulfide interchange protein TlpA. | Heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF; Possible subunit of a heme lyase. | 0.965 |
| ccmA | VF_1549 | VF_1824 | VF_1549 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Thiol:disulfide interchange protein TlpA. | 0.748 |
| ccmA | ccmB | VF_1824 | VF_1823 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter subunit B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.999 |
| ccmA | ccmC | VF_1824 | VF_1822 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter subunit C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.998 |
| ccmA | ccmE | VF_1824 | VF_1820 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Periplasmic heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.953 |
| ccmA | ccmG | VF_1824 | VF_1818 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Periplasmic thioredoxin of cytochrome c-type biogenesis. | 0.902 |
| ccmA | ccmH | VF_1824 | VF_1817 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase. | 0.927 |
| ccmA | ccmI | VF_1824 | VF_1816 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein CcmI. | 0.910 |
| ccmA | nrfE | VF_1824 | VF_1550 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE. | 0.802 |
| ccmA | nrfF | VF_1824 | VF_1548 | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF; Possible subunit of a heme lyase. | 0.818 |
| ccmB | VF_1549 | VF_1823 | VF_1549 | Heme exporter subunit B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Thiol:disulfide interchange protein TlpA. | 0.812 |
| ccmB | ccmA | VF_1823 | VF_1824 | Heme exporter subunit B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme exporter subunit A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.999 |
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