STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgJFlagellum-specific peptidoglycan hydrolase/muramidase, FlgJ. (339 aa)    
Predicted Functional Partners:
flgK
Flagellar hook-associated protein 1, FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.999
flgI
Flagellar basal body P ring protein flgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.999
flgH
Flagellar basal body L ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.999
flgG
Flagellar distal rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.999
flgF
Flagellar proximal rod protein FlgF.
 
  
 0.999
flgE
Flagellar hook protein FlgE.
 
  
 0.999
flgD
Flagellar hook capping protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.999
flgB
Flagellar proximal rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.999
fliK
Flagellar hook length control protein FliK.
 
  
 0.998
flgC
Flagellar proximal rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.998
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.