STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
narQSensory histidine kinase in two-component regulatory system with NarP (NarL). (563 aa)    
Predicted Functional Partners:
narP
DNA-binding response regulator in two-component regulatory system with NarQ.
 
 0.998
uhpA
DNA-binding response regulator in two-component regulatory system wtih UhpB.
 
 
 0.816
napA
Nitrate reductase, large, cytochrome C550 subunit, periplasmic; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
   
 0.753
napD
Protein required for assembly of periplasmic nitrate reductase (NapA); Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
 
    0.750
vpsT
DNA-binding transcriptional activator VpsT (CsgD-like).
 
 
 0.738
VF_1910
Ubiquinone biosynthesis protein AarF.
       0.709
napB
Nitrate reductase, small, cytochrome C550 subunit, periplasmic; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
     0.701
gacA
DNA-binding response regulator in two-component regulatory system with GacS.
 
 
 0.696
napC
Nitrate reductase, cytochrome c-type, periplasmic.
 
   
 0.690
VF_2374
Two-component response regulator.
 
 
 0.647
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.