STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF_1925Hypothetical protein. (391 aa)    
Predicted Functional Partners:
VF_0426
Conserved secreted protein.
  
     0.744
VF_1828
C-terminal CheW domain, putative chemotaxis coupling protein.
  
     0.656
fliL2
Flagellar basal body-associated protein FliL2; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.621
yraM
Conserved protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a).
  
     0.605
uraA
Uracil transporter.
       0.536
gspM
Cholera toxin secretion protein EpsM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.534
VF_2520
Cytochrome c5.
  
     0.521
VF_1288
Glutaredoxin-like domain.
  
     0.520
VF_1693
DedD protein.
  
     0.519
VF_A0434
DnaJ-related protein.
  
     0.509
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.