STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRSensory histidine kinase in two-component regulatory system with PhoB. (431 aa)    
Predicted Functional Partners:
phoB
DNA-binding response regulator in two-component regulatory system with PhoR.
 0.998
arcB
Hybrid sensory histidine kinase in two-component regulatory system with ArcA.
 
0.821
pstS
Phosphate-binding protein.
 
  
 0.812
ompR
OmpR DNA-binding osmolarity response regulator in two-component regulatory system with EnvZ.
 
 0.808
phoU
Negative regulator of PhoR/PhoB two-component regulator; Plays a role in the regulation of phosphate uptake.
 
   
 0.802
arcA
DNA-binding response regulator in two-component regulatory system with ArcB or CpxA.
 
 0.795
VF_A0181
Probable transcriptional regulator SyrB.
 
 0.759
pstA
Phosphate transport system permease protein PstA.
 
   
 0.756
phoP
DNA-binding response regulator in two-component regulatory system with PhoQ.
 
 0.753
VF_A0211
Transcriptional regulator.
 
 0.746
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.