Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gltBGlutamate synthase, large subunit. (1515 aa)    
Predicted Functional Partners:
fadH
2,4-dienoyl-CoA reductase, NADH and FMN-linked.
  
 
 0.999
gltD
Glutamate synthase, 4Fe-4S protein, small subunit.
 0.999
yeiT
Predicted oxidoreductase.
 
 0.999
fdhF
Formate dehydrogenase-H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.999
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.980
glnA
Glutamine synthetase.
  
 
 0.978
glmS
L-glutamine:D-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.974
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.960
yneH
Predicted glutaminase; Belongs to the glutaminase family.
     
 0.955
VF_1284
NAD-specific glutamate dehydrogenase.
     
 0.955
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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