STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF_2144Endochitinase. (572 aa)    
Predicted Functional Partners:
VF_2145
N-acetylglucosamine kinase.
 
     0.885
VF_2146
Beta-hexosaminidase.
 
     0.879
VF_1390
Carbohydrate binding domain protein.
  
     0.768
VF_1059
Basic endochitinase.
  
     0.752
VF_2139
Chitooligosaccharide-binding protein.
 
     0.729
chiA
Endochitinase.
  
     0.721
VF_2147
N,N'-diacetylchitobiose phosphorylase.
 
     0.713
VF_1598
Exochitinase.
  
     0.710
VF_2143
Chitooligosaccharide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.708
gbpA
GlcNac-binding protein A; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. Belongs to the GbpA family.
  
     0.706
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.