STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeiTPredicted oxidoreductase. (598 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit.
 
 0.999
VF_A0099
Glutamate synthase.
 
 0.997
ddhD
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.979
fre
Flavin reductase.
  
 
 0.898
luxG
NAD(P)H-dependent FMN reductase LuxG.
  
 
 0.898
ydiJ
Predicted FAD-linked oxidoreductase.
  
 
 0.846
glpC
Sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit GlpC.
  
 
 0.808
ydjX
Predicted inner membrane protein.
 
     0.798
VF_A0101
Thiosulfate sulfurtransferase.
 
   
 0.731
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.666
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.