STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF_A0118Morphinone reductase. (367 aa)    
Predicted Functional Partners:
nemA
N-ethylmaleimide reductase, FMN-linked.
  
  
 
0.903
yfcG
Predicted glutathione S-transferase.
  
 
 0.778
VF_A0119
Lactoylglutathione lyase.
     
 0.745
VF_1068
Pirin; Belongs to the pirin family.
     
 0.658
VF_A0742
Hypothetical protein.
  
   
 0.626
VF_1161
Periplasmic component of efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  
 0.592
glpQ
Glycerophosphoryl diester phosphodiesterase GlpQ (UgpQ).
     
 0.591
VF_A0117
Transporter, drug/metabolite exporter family.
       0.588
VF_A0044
Acriflavin resistance periplasmic protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  
 0.579
VF_1081
Transcriptional regulator, TetR family.
  
  
 0.554
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.