STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ebgCEvolved beta-D-galactosidase, beta subunit. (150 aa)    
Predicted Functional Partners:
ebgA
Evolved beta-D-galactosidase, alpha subunit.
   
  0.992
galM
Galactose-1-epimerase (mutarotase); Converts alpha-aldose to the beta-anomer.
    
  0.910
VF_A0301
Alpha-galactosidase.
     
  0.900
dppB
Dipeptide transport system permease protein DppB.
     
 0.800
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
     
 0.777
fruA
Fused fructose-specific PTS enzymes: IIBcomponent/IIC components.
      
 0.497
yihA
Cell division GTPase YihA; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
      
 0.493
crr
Glucose-specific enzyme IIA component of PTS.
      
 0.482
ygjI
Predicted transporter.
       0.475
ebgR
Ebg operon repressor.
       0.431
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.