Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_A0472 | rpsF | VF_A0472 | VF_2312 | Transporter. | 30S ribosomal subunit protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.411 |
VF_A0472 | tcpH | VF_A0472 | VF_A0474 | Transporter. | TcpH protein. | 0.403 |
VF_A0472 | tcpP | VF_A0472 | VF_A0473 | Transporter. | Transcriptional regulatory protein TcpP. | 0.403 |
VF_A0472 | tolB | VF_A0472 | VF_0962 | Transporter. | Periplasmic protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.504 |
rpsF | VF_A0472 | VF_2312 | VF_A0472 | 30S ribosomal subunit protein S6; Binds together with S18 to 16S ribosomal RNA. | Transporter. | 0.411 |
tcpH | VF_A0472 | VF_A0474 | VF_A0472 | TcpH protein. | Transporter. | 0.403 |
tcpH | tcpP | VF_A0474 | VF_A0473 | TcpH protein. | Transcriptional regulatory protein TcpP. | 0.882 |
tcpP | VF_A0472 | VF_A0473 | VF_A0472 | Transcriptional regulatory protein TcpP. | Transporter. | 0.403 |
tcpP | tcpH | VF_A0473 | VF_A0474 | Transcriptional regulatory protein TcpP. | TcpH protein. | 0.882 |
tolB | VF_A0472 | VF_0962 | VF_A0472 | Periplasmic protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | Transporter. | 0.504 |