Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_1330 | VF_A0478 | VF_1330 | VF_A0478 | Carbohydrate binding domain protein. | N-acetylglucosaminyltransferase. | 0.643 |
VF_A0465 | VF_A0467 | VF_A0465 | VF_A0467 | Hypothetical protein. | Hypothetical permease; N-acetylglucosaminyltransferase, -1 frameshift to create pseudogene. | 0.779 |
VF_A0465 | VF_A0478 | VF_A0465 | VF_A0478 | Hypothetical protein. | N-acetylglucosaminyltransferase. | 0.790 |
VF_A0465 | VF_A0479 | VF_A0465 | VF_A0479 | Hypothetical protein. | Hypothetical protein. | 0.779 |
VF_A0465 | VF_A0531 | VF_A0465 | VF_A0531 | Hypothetical protein. | Hypothetical cyclic nucleotide-binding domain protein. | 0.708 |
VF_A0467 | VF_A0465 | VF_A0467 | VF_A0465 | Hypothetical permease; N-acetylglucosaminyltransferase, -1 frameshift to create pseudogene. | Hypothetical protein. | 0.779 |
VF_A0467 | VF_A0477 | VF_A0467 | VF_A0477 | Hypothetical permease; N-acetylglucosaminyltransferase, -1 frameshift to create pseudogene. | Hypothetical protein. | 0.782 |
VF_A0467 | VF_A0478 | VF_A0467 | VF_A0478 | Hypothetical permease; N-acetylglucosaminyltransferase, -1 frameshift to create pseudogene. | N-acetylglucosaminyltransferase. | 0.771 |
VF_A0467 | VF_A0531 | VF_A0467 | VF_A0531 | Hypothetical permease; N-acetylglucosaminyltransferase, -1 frameshift to create pseudogene. | Hypothetical cyclic nucleotide-binding domain protein. | 0.517 |
VF_A0475 | VF_A0476 | VF_A0475 | VF_A0476 | GGDEF domain protein. | GGDEF domain protein. | 0.779 |
VF_A0475 | VF_A0477 | VF_A0475 | VF_A0477 | GGDEF domain protein. | Hypothetical protein. | 0.518 |
VF_A0475 | VF_A0478 | VF_A0475 | VF_A0478 | GGDEF domain protein. | N-acetylglucosaminyltransferase. | 0.502 |
VF_A0475 | VF_A0479 | VF_A0475 | VF_A0479 | GGDEF domain protein. | Hypothetical protein. | 0.412 |
VF_A0476 | VF_A0475 | VF_A0476 | VF_A0475 | GGDEF domain protein. | GGDEF domain protein. | 0.779 |
VF_A0476 | VF_A0477 | VF_A0476 | VF_A0477 | GGDEF domain protein. | Hypothetical protein. | 0.531 |
VF_A0476 | VF_A0478 | VF_A0476 | VF_A0478 | GGDEF domain protein. | N-acetylglucosaminyltransferase. | 0.514 |
VF_A0476 | VF_A0479 | VF_A0476 | VF_A0479 | GGDEF domain protein. | Hypothetical protein. | 0.504 |
VF_A0477 | VF_A0467 | VF_A0477 | VF_A0467 | Hypothetical protein. | Hypothetical permease; N-acetylglucosaminyltransferase, -1 frameshift to create pseudogene. | 0.782 |
VF_A0477 | VF_A0475 | VF_A0477 | VF_A0475 | Hypothetical protein. | GGDEF domain protein. | 0.518 |
VF_A0477 | VF_A0476 | VF_A0477 | VF_A0476 | Hypothetical protein. | GGDEF domain protein. | 0.531 |
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