Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_1094 | VF_A0653 | VF_1094 | VF_A0653 | SAM-dependent methyltransferase. | IAA acetyltransferase. | 0.488 |
VF_A0653 | VF_1094 | VF_A0653 | VF_1094 | IAA acetyltransferase. | SAM-dependent methyltransferase. | 0.488 |
VF_A0653 | VF_A0654 | VF_A0653 | VF_A0654 | IAA acetyltransferase. | Hypothetical protein. | 0.477 |
VF_A0653 | guaA | VF_A0653 | VF_0638 | IAA acetyltransferase. | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | 0.448 |
VF_A0653 | ureD | VF_A0653 | VF_0676 | IAA acetyltransferase. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.419 |
VF_A0653 | yjaB | VF_A0653 | VF_A1054 | IAA acetyltransferase. | Predicted acetyltransferase. | 0.517 |
VF_A0654 | VF_A0653 | VF_A0654 | VF_A0653 | Hypothetical protein. | IAA acetyltransferase. | 0.477 |
guaA | VF_A0653 | VF_0638 | VF_A0653 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | IAA acetyltransferase. | 0.448 |
guaA | yjaB | VF_0638 | VF_A1054 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Predicted acetyltransferase. | 0.448 |
ureD | VF_A0653 | VF_0676 | VF_A0653 | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | IAA acetyltransferase. | 0.419 |
yjaB | VF_A0653 | VF_A1054 | VF_A0653 | Predicted acetyltransferase. | IAA acetyltransferase. | 0.517 |
yjaB | guaA | VF_A1054 | VF_0638 | Predicted acetyltransferase. | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | 0.448 |