STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF_A0782Ferrichrome-binding protein. (314 aa)    
Predicted Functional Partners:
VF_A0781
Ferrichrome transport system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.992
VF_A0783
Ferrichrome transport ATP-binding protein FhuC.
 
 
 0.992
fhuC
Iron-hydroxamate transporter subunit.
 
 
 0.967
fhuB
Fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.967
fhuD
Iron-hydroxamate transporter subunit.
 
 
0.935
vctD
Ferric anguibactin transport system permease protein FatD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.810
fhuA
Ferrichrome outer membrane transporter.
 
     0.789
VF_A0825
Ferric anguibactin transport system permease protein FatC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.765
vctC
Ferric anguibactin transport ATP-binding protein.
  
  
 0.744
VF_A0156
Hypothetical protein.
 
     0.664
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.