Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_0141 | VF_0172 | VF_0141 | VF_0172 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | O-acetyltransferase. | 0.429 |
VF_0141 | VF_A0790 | VF_0141 | VF_A0790 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Chloramphenicol acetyltransferase. | 0.417 |
VF_0141 | VF_A0915 | VF_0141 | VF_A0915 | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | Acetyltransferase. | 0.411 |
VF_0172 | VF_0141 | VF_0172 | VF_0141 | O-acetyltransferase. | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | 0.429 |
VF_0172 | VF_A0790 | VF_0172 | VF_A0790 | O-acetyltransferase. | Chloramphenicol acetyltransferase. | 0.452 |
VF_0172 | VF_A0915 | VF_0172 | VF_A0915 | O-acetyltransferase. | Acetyltransferase. | 0.694 |
VF_0172 | ddhC | VF_0172 | VF_0184 | O-acetyltransferase. | CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family. | 0.429 |
VF_A0790 | VF_0141 | VF_A0790 | VF_0141 | Chloramphenicol acetyltransferase. | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | 0.417 |
VF_A0790 | VF_0172 | VF_A0790 | VF_0172 | Chloramphenicol acetyltransferase. | O-acetyltransferase. | 0.452 |
VF_A0790 | VF_A0915 | VF_A0790 | VF_A0915 | Chloramphenicol acetyltransferase. | Acetyltransferase. | 0.753 |
VF_A0790 | ddhC | VF_A0790 | VF_0184 | Chloramphenicol acetyltransferase. | CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family. | 0.417 |
VF_A0915 | VF_0141 | VF_A0915 | VF_0141 | Acetyltransferase. | UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family. | 0.411 |
VF_A0915 | VF_0172 | VF_A0915 | VF_0172 | Acetyltransferase. | O-acetyltransferase. | 0.694 |
VF_A0915 | VF_A0790 | VF_A0915 | VF_A0790 | Acetyltransferase. | Chloramphenicol acetyltransferase. | 0.753 |
VF_A0915 | VmrA | VF_A0915 | VF_A0916 | Acetyltransferase. | Sodium-driven multidrug efflux pump. | 0.521 |
VF_A0915 | ddhC | VF_A0915 | VF_0184 | Acetyltransferase. | CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family. | 0.411 |
VF_A0915 | ytfL | VF_A0915 | VF_A0914 | Acetyltransferase. | Predicted inner membrane protein. | 0.435 |
VmrA | VF_A0915 | VF_A0916 | VF_A0915 | Sodium-driven multidrug efflux pump. | Acetyltransferase. | 0.521 |
ddhC | VF_0172 | VF_0184 | VF_0172 | CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family. | O-acetyltransferase. | 0.429 |
ddhC | VF_A0790 | VF_0184 | VF_A0790 | CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase; Belongs to the DegT/DnrJ/EryC1 family. | Chloramphenicol acetyltransferase. | 0.417 |
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