STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
VF_A1069Methyl-accepting chemotaxis protein. (531 aa)    
Predicted Functional Partners:
cheA
Chemotactic sensory histidine kinase CheA, in two-component regulatory system with CheB and CheY.
 
 0.983
cheW
Chemotaxis coupling protein CheW.
 
 0.964
cheR
Chemotaxis regulator, protein-glutamate methyltransferase, CheR.
 
 0.937
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.936
cheV3
CheW/CheY hybrid protein CheV3.
 
 0.929
cheV2
CheW/CheY hybrid protein CheV2.
 
 0.927
cheV1
CheW/CheY hybrid protein CheV1.
 
 0.907
ygeA
Predicted racemase.
      
 0.785
cheY
Chemotaxis regulator CheY, transmits signal to flagellar motor component.
 
 0.779
VF_1828
C-terminal CheW domain, putative chemotaxis coupling protein.
   
  0.760
Your Current Organism:
Aliivibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri ES114, Aliivibrio fischeri ES114, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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