Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_0087 | VF_0094 | VF_0087 | VF_0094 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.693 |
VF_0087 | VF_1515 | VF_0087 | VF_1515 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.854 |
VF_0087 | VF_2261 | VF_0087 | VF_2261 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.900 |
VF_0087 | VF_A0056 | VF_0087 | VF_A0056 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.886 |
VF_0087 | VF_A0057 | VF_0087 | VF_A0057 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.849 |
VF_0087 | VF_A1076 | VF_0087 | VF_A1076 | Sensory transduction protein kinase. | EAL domain protein. | 0.816 |
VF_0087 | adrA | VF_0087 | VF_A0796 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.805 |
VF_0087 | mifA | VF_0087 | VF_0989 | Sensory transduction protein kinase. | Diguanylate cyclase (GGDEF), inhibitor of flagellar motility. | 0.899 |
VF_0087 | ydaM | VF_0087 | VF_A0567 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.850 |
VF_0087 | yeaP | VF_0087 | VF_2362 | Sensory transduction protein kinase. | GGDEF domain protein. | 0.884 |
VF_0094 | VF_0087 | VF_0094 | VF_0087 | GGDEF domain protein. | Sensory transduction protein kinase. | 0.693 |
VF_0094 | VF_1515 | VF_0094 | VF_1515 | GGDEF domain protein. | GGDEF domain protein. | 0.574 |
VF_0094 | VF_2261 | VF_0094 | VF_2261 | GGDEF domain protein. | GGDEF domain protein. | 0.899 |
VF_0094 | VF_A0056 | VF_0094 | VF_A0056 | GGDEF domain protein. | GGDEF domain protein. | 0.667 |
VF_0094 | VF_A0057 | VF_0094 | VF_A0057 | GGDEF domain protein. | GGDEF domain protein. | 0.868 |
VF_0094 | VF_A1076 | VF_0094 | VF_A1076 | GGDEF domain protein. | EAL domain protein. | 0.810 |
VF_0094 | adrA | VF_0094 | VF_A0796 | GGDEF domain protein. | GGDEF domain protein. | 0.807 |
VF_0094 | mifA | VF_0094 | VF_0989 | GGDEF domain protein. | Diguanylate cyclase (GGDEF), inhibitor of flagellar motility. | 0.898 |
VF_0094 | ydaM | VF_0094 | VF_A0567 | GGDEF domain protein. | GGDEF domain protein. | 0.611 |
VF_0094 | yeaP | VF_0094 | VF_2362 | GGDEF domain protein. | GGDEF domain protein. | 0.722 |
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