STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_00043Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
Cre-dlg-1
CRE-DLG-1 protein; Belongs to the MAGUK family.
   
 0.693
CRE_29885
Uncharacterized protein.
   
 0.693
CRE_07883
Guanylate kinase-like domain-containing protein.
   
 0.693
CRE_07884
Uncharacterized protein.
   
 0.693
CRE_05600
PDZ domain-containing protein.
    
  0.671
Cre-tag-117
CRE-TAG-117 protein; Belongs to the MAGUK family.
    
  0.671
Cre-magi-1
CRE-MAGI-1 protein.
    
 0.636
CRE_31560
Uncharacterized protein.
    
 0.636
CRE_19599
Guanylate kinase-like domain-containing protein.
    
 0.636
CRE_28028
Guanylate kinase-like domain-containing protein.
    
  0.625
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.