STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_18722Uncharacterized protein. (3125 aa)    
Predicted Functional Partners:
CRE_24006
Uncharacterized protein.
  
 
 0.859
CRE_24009
Uncharacterized protein.
  
 
 0.838
CRE_24008
Uncharacterized protein.
  
 
 0.822
Cre-igcm-1
CRE-IGCM-1 protein.
    
 0.795
Cre-syg-2
CRE-SYG-2 protein.
    
 0.795
CRE_24005
Uncharacterized protein.
    
 0.768
Cre-unc-89
CRE-UNC-89 protein.
    
 0.768
Cre-let-413
CRE-LET-413 protein.
    
 0.757
Cre-ina-1
CRE-INA-1 protein; Belongs to the integrin alpha chain family.
  
 
 0.750
Cre-ptp-2
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.742
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.