STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cre-nhr-130CRE-NHR-130 protein. (849 aa)    
Predicted Functional Partners:
Cre-aha-1
CRE-AHA-1 protein.
    
 0.733
CRE_31478
CS domain-containing protein.
   
  0.614
Cre-gei-8
CRE-GEI-8 protein.
    
 0.609
CRE_16573
ESPR domain-containing protein.
    
 0.609
Cre-fkb-6
Peptidylprolyl isomerase.
    
  0.566
Cre-lex-1
CRE-LEX-1 protein.
    
  0.563
Cre-cash-1
CRE-CASH-1 protein.
    
  0.521
Cre-rnt-1
CRE-RNT-1 protein.
   
  0.519
Cre-daf-21
CRE-DAF-21 protein.
    
 0.501
CRE_16358
Uncharacterized protein.
    
 0.501
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.