STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_28329Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
Cre-srsx-5
CRE-SRSX-5 protein.
      
 0.567
CRE_15994
Uncharacterized protein.
      
 0.567
odr-10
CRE-ODR-10 protein.
      
 0.556
Cre-srt-30
CRE-SRT-30 protein.
      
 0.554
Cre-srj-21
CRE-SRJ-21 protein.
      
 0.554
Cre-sra-13
CRE-SRA-13 protein.
      
 0.553
Cre-srh-79
CRE-SRH-79 protein.
      
 0.552
Cre-srt-28
CRE-SRT-28 protein.
      
 0.530
Cre-srab-16
CRE-SRAB-16 protein.
      
 0.530
Cre-srt-45
CRE-SRT-45 protein.
      
 0.530
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.