STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_26310G_PROTEIN_RECEP_F1_2 domain-containing protein. (336 aa)    
Predicted Functional Partners:
Cre-clec-89
CRE-CLEC-89 protein.
      
 0.847
CRE_18927
Uncharacterized protein.
      
 0.714
CRE_23266
Uncharacterized protein.
      
 0.714
CRE_17107
Uncharacterized protein.
      
 0.544
Cre-nas-3
Metalloendopeptidase.
      
 0.525
CRE_10794
Metalloendopeptidase.
      
 0.525
CRE_14107
Uncharacterized protein.
      
 0.468
CRE_13856
Uncharacterized protein.
      
 0.468
Cre-lys-1
CRE-LYS-1 protein.
      
 0.426
CRE_07379
Uncharacterized protein.
      
 0.426
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.