STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_25371AB hydrolase-1 domain-containing protein. (483 aa)    
Predicted Functional Partners:
Cre-rnf-5
CRE-RNF-5 protein.
    
 
 0.539
CRE_27489
Hydrolase_4 domain-containing protein.
      
 0.508
Cre-psd-1
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
      
 0.504
Cre-imp-2
CRE-IMP-2 protein.
   
 
 0.502
CRE_15201
Uncharacterized protein.
   
 
 0.500
CRE_17088
AB hydrolase-1 domain-containing protein.
      
 0.434
Cre-ift-81
CRE-IFT-81 protein.
      
 0.428
CRE_24778
Uncharacterized protein.
      
 0.426
Cre-ath-1
CRE-ATH-1 protein.
      
 0.410
CRE_05884
ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.
    
 
 0.407
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
Server load: low (28%) [HD]