STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_25082Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
Cre-gei-8
CRE-GEI-8 protein.
    
 0.858
CRE_15991
Nuclear receptor domain-containing protein.
  
 
 0.840
Cre-nhr-2
CRE-NHR-2 protein.
   
 0.827
Cre-nhr-8
CRE-NHR-8 protein.
   
 0.810
CRE_14664
Nuclear receptor domain-containing protein.
   
 0.810
Cre-nhr-48
CRE-NHR-48 protein.
   
 0.810
CRE_05362
Uncharacterized protein.
   
 0.810
Cre-nhr-6
CRE-NHR-6 protein.
  
 
 0.765
Cre-aha-1
CRE-AHA-1 protein.
   
 0.736
Cre-lbp-6
CRE-LBP-6 protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
  
 0.735
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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