STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_10311Protein kinase domain-containing protein. (829 aa)    
Predicted Functional Partners:
CRE_14739
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.615
Cre-cpsf-1
CRE-CPSF-1 protein.
   
  
 0.600
CRE_26119
Uncharacterized protein.
      
 0.594
Cre-evl-14
CRE-EVL-14 protein.
    
 
 0.524
CRE_11837
Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
  
 0.509
Cre-san-1
CRE-SAN-1 protein.
   
 
 0.456
Cre-bub-1
CRE-BUB-1 protein.
   
 
 0.456
CRE_01039
Mcm10 domain-containing protein.
   
  
 0.447
Cre-icp-1
CRE-ICP-1 protein.
   
  
 0.444
Cre-ife-4
CRE-IFE-4 protein; Belongs to the eukaryotic initiation factor 4E family.
   
    0.426
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.