STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_17213Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
Cre-spat-3
CRE-SPAT-3 protein.
    
 0.901
Cre-cec-1
CRE-CEC-1 protein.
    
 0.899
Cre-mig-32
CRE-MIG-32 protein.
   
 0.899
Cre-mdt-29
CRE-MDT-29 protein.
   
 0.883
Cre-tag-294
CRE-TAG-294 protein.
    
 0.882
Cre-dpl-1
CRE-DPL-1 protein.
   
 0.852
Cre-hpl-2
CRE-HPL-2 protein.
    
 0.835
CRE_17041
Uncharacterized protein.
    
 0.835
CRE_19236
Chromo domain-containing protein.
    
 0.835
CRE_20549
Chromo domain-containing protein.
    
 0.835
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.