STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cre-aagr-4CRE-AAGR-4 protein; Belongs to the glycosyl hydrolase 31 family. (903 aa)    
Predicted Functional Partners:
CRE_20467
Uncharacterized protein.
   
 0.997
CRE_00757
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.963
CRE_12753
Uncharacterized protein.
   
 0.945
CRE_13826
Glyco_hydro_63N domain-containing protein.
   
 0.945
CRE_22873
MYST-type HAT domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.912
CRE_22811
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
  
  
 
0.909
CRE_14119
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.908
Cre-cnx-1
CRE-CNX-1 protein.
    
 0.905
Cre-npp-11
CRE-NPP-11 protein.
    
 0.893
CRE_00138
Glyco_hydro_63 domain-containing protein.
   
 0.817
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.