STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_20280Uncharacterized protein. (972 aa)    
Predicted Functional Partners:
Cre-ccf-1
CRE-CCF-1 protein.
   
 0.995
CRE_20295
Uncharacterized protein.
    
 0.992
CRE_22174
Uncharacterized protein.
    
 0.991
Cre-ntl-2
CRE-NTL-2 protein.
   
 0.987
Cre-ntl-3
CRE-NTL-3 protein.
    
 0.985
CRE_27842
NOT2_3_5 domain-containing protein.
    
 0.985
Cre-tag-153
CRE-TAG-153 protein.
   
 0.982
Cre-ntl-4
CRE-NTL-4 protein.
    
 0.977
Cre-cgh-1
CRE-CGH-1 protein; Belongs to the DEAD box helicase family.
   
 0.972
CRE_20642
Uncharacterized protein.
    
 0.972
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.