STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_25007Uncharacterized protein. (109 aa)    
Predicted Functional Partners:
Cre-nol-6
Nucleolar protein 6.
   
 0.976
CRE_02263
Sas10 domain-containing protein.
   
 0.960
CRE_02262
Uncharacterized protein.
   
 0.958
CRE_27763
Uncharacterized protein.
   
 
 0.958
Cre-lpd-2
CRE-LPD-2 protein.
   
 0.949
Cre-lpd-7
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.943
CRE_29724
Uncharacterized protein.
  
 0.939
CRE_18888
Utp12 domain-containing protein.
   
 0.927
Cre-byn-1
CRE-BYN-1 protein.
   
 
 0.925
CRE_25379
Uncharacterized protein.
   
 0.918
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.