STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_29915FHA domain-containing protein. (545 aa)    
Predicted Functional Partners:
Cre-uev-1
CRE-UEV-1 protein.
   
 0.965
Cre-let-70
CRE-LET-70 protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.956
Cre-uev-3
CRE-UEV-3 protein.
  
 0.956
Cre-ubc-13
CRE-UBC-13 protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.956
CRE_17127
Uncharacterized protein.
      
 0.945
CRE_19220
Ubiquitin-like domain-containing protein.
   
 0.945
Cre-ubl-1
CRE-UBL-1 protein.
   
 0.945
Cre-ubq-2
CRE-UBQ-2 protein.
    
  0.939
CRE_15697
Ribosomal_L40e domain-containing protein.
    
  0.939
Cre-hsr-9
CRE-HSR-9 protein.
    
 0.932
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.