Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRE_01242 | Cre-clec-135 | E3N4R9 | E3MU44 | Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. | CRE-CLEC-135 protein. | 0.471 |
CRE_26482 | Cre-clec-135 | E3LQR9 | E3MU44 | Uncharacterized protein. | CRE-CLEC-135 protein. | 0.408 |
Cre-clec-135 | CRE_01242 | E3MU44 | E3N4R9 | CRE-CLEC-135 protein. | Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. | 0.471 |
Cre-clec-135 | CRE_26482 | E3MU44 | E3LQR9 | CRE-CLEC-135 protein. | Uncharacterized protein. | 0.408 |
Cre-clec-135 | Cre-lat-1 | E3MU44 | E3LG23 | CRE-CLEC-135 protein. | CRE-LAT-1 protein; Belongs to the G-protein coupled receptor 2 family. | 0.672 |
Cre-lat-1 | Cre-clec-135 | E3LG23 | E3MU44 | CRE-LAT-1 protein; Belongs to the G-protein coupled receptor 2 family. | CRE-CLEC-135 protein. | 0.672 |