STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_12937Uncharacterized protein. (811 aa)    
Predicted Functional Partners:
Cre-npp-11
CRE-NPP-11 protein.
    
 0.887
Cre-unc-10
CRE-UNC-10 protein.
    
  0.882
CRE_13356
Uncharacterized protein.
    
 0.868
Cre-unc-79
CRE-UNC-79 protein.
    
 0.868
Cre-utx-1
CRE-UTX-1 protein.
    
 0.819
CRE_14303
Uncharacterized protein.
    
 0.819
CRE_26573
WD_REPEATS_REGION domain-containing protein.
    
 0.805
Cre-ash-2
CRE-ASH-2 protein.
    
 0.805
Cre-npp-5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.782
Cre-npp-15
CRE-NPP-15 protein.
    
 0.779
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.