STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_24132Uncharacterized protein. (821 aa)    
Predicted Functional Partners:
Cre-vps-32.1
CRE-VPS-32.1 protein.
    
 0.949
CRE_26323
Uncharacterized protein.
    
 0.903
Cre-ben-1
CRE-BEN-1 protein; Belongs to the tubulin family.
     
 0.809
Cre-tbb-1
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
     
 0.809
CRE_11883
Uncharacterized protein.
     
 0.769
Cre-vps-2
CRE-VPS-2 protein.
     
 0.766
CRE_27146
Uncharacterized protein.
     
 0.762
Cre-vps-20
CRE-VPS-20 protein.
     
 0.761
CRE_01899
Uncharacterized protein.
     
 0.758
Cre-vps-4
CRE-VPS-4 protein; Belongs to the AAA ATPase family.
     
 0.729
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.