STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_30127BHLH domain-containing protein. (103 aa)    
Predicted Functional Partners:
Cre-hlh-2
CRE-HLH-2 protein.
    
 
 0.648
Cre-egl-46
CRE-EGL-46 protein.
   
 0.631
Cre-hlh-15
CRE-HLH-15 protein.
  
 
 0.525
CRE_30023
BHLH domain-containing protein.
    
 0.489
CRE_30602
BHLH domain-containing protein.
    
 0.489
CRE_01728
Uncharacterized protein.
    
 0.455
Cre-odr-2
CRE-ODR-2 protein.
    
 0.455
Cre-hot-1
CRE-HOT-1 protein.
    
 0.455
CRE_06156
Uncharacterized protein.
    
 0.455
Cre-ptr-10
CRE-PTR-10 protein.
   
  
 0.449
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.