STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cre-clec-222CRE-CLEC-222 protein. (250 aa)    
Predicted Functional Partners:
CRE_24216
Uncharacterized protein.
      
 0.721
CRE_16427
Uncharacterized protein.
   
  
 0.646
Cre-clec-150
CRE-CLEC-150 protein.
      
 0.570
Cre-clec-145
CRE-CLEC-145 protein.
      
 0.553
Cre-cof-2
CRE-COF-2 protein.
      
 0.552
Cre-pot-1
CRE-POT-1 protein.
      
 0.551
Cre-clec-266
CRE-CLEC-266 protein.
      
 0.549
Cre-spp-23
CRE-SPP-23 protein.
      
 0.549
Cre-clec-143
CRE-CLEC-143 protein.
      
 0.535
Cre-clec-62
CRE-CLEC-62 protein.
      
 0.535
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.