STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_08614Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
Cre-lin-54
CRE-LIN-54 protein.
    
 0.703
CRE_04026
Uncharacterized protein.
    
 0.690
Cre-rba-1
CRE-RBA-1 protein.
    
 0.647
Cre-lin-53
CRE-LIN-53 protein.
    
 0.647
Cre-lin-9
CRE-LIN-9 protein.
    
 0.641
Cre-rpa-4
CRE-RPA-4 protein.
   
 0.637
Cre-rpa-2
CRE-RPA-2 protein.
   
 0.637
Cre-lin-52
CRE-LIN-52 protein.
    
 0.626
Cre-lin-35
CRE-LIN-35 protein.
    
 0.615
Cre-dut-1
CRE-DUT-1 protein.
    
  0.600
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.