STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_06182C3H1-type domain-containing protein. (543 aa)    
Predicted Functional Partners:
Cre-ets-4
CRE-ETS-4 protein.
      
 0.865
Cre-rle-1
CRE-RLE-1 protein.
  
  
 0.737
CRE_15347
ANK_REP_REGION domain-containing protein.
   
 
 0.720
Cre-ned-8
CRE-NED-8 protein.
    
   0.650
CRE_21200
Ubiquitin-like domain-containing protein.
    
   0.650
Cre-lpd-2
CRE-LPD-2 protein.
   
  
 0.648
CRE_20336
Aamy domain-containing protein.
      
 0.642
CRE_31245
Fork-head domain-containing protein.
    
  0.629
CRE_31246
Fork-head domain-containing protein.
    
  0.629
CRE_02680
Uncharacterized protein.
   
 
  0.613
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.