STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_15179Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
CRE_12564
HATPase_c domain-containing protein.
  
 0.830
CRE_23240
HATPase_c domain-containing protein.
  
 0.830
CRE_07193
Uncharacterized protein.
  
 0.830
Cre-daf-21
CRE-DAF-21 protein.
  
 0.825
CRE_16358
Uncharacterized protein.
  
 0.825
Cre-utx-1
CRE-UTX-1 protein.
  
 0.775
CRE_14303
Uncharacterized protein.
  
 0.775
Cre-hsp-3
CRE-HSP-3 protein.
  
 0.765
CRE_26406
Uncharacterized protein.
  
 0.765
Cre-hsp-4
CRE-HSP-4 protein; Belongs to the heat shock protein 70 family.
  
 0.765
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.