STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_11592TAF6_C domain-containing protein. (959 aa)    
Predicted Functional Partners:
CRE_17917
Uncharacterized protein.
    
 0.996
CRE_27660
PHD-type domain-containing protein.
    
 0.996
Cre-taf-12
CRE-TAF-12 protein.
   
 0.982
Cre-taf-1
CRE-TAF-1 protein.
    
 0.981
Cre-taf-4
CRE-TAF-4 protein.
    
 0.981
Cre-taf-8
CRE-TAF-8 protein.
    
 0.981
Cre-tbp-1
CRE-TBP-1 protein.
   
 0.974
Cre-taf-5
CRE-TAF-5 protein.
   
 0.974
Cre-taf-9
CRE-TAF-9 protein.
   
 0.973
Cre-taf-13
CRE-TAF-13 protein.
    
 0.972
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.