STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_22238Uncharacterized protein. (234 aa)    
Predicted Functional Partners:
Cre-ina-1
CRE-INA-1 protein; Belongs to the integrin alpha chain family.
    
 0.714
Cre-pat-2
CRE-PAT-2 protein; Belongs to the integrin alpha chain family.
    
 0.714
CRE_26954
Uncharacterized protein.
    
 0.693
Cre-dsl-7
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
      
 0.675
Cre-pat-3
Integrin beta; Belongs to the integrin beta chain family.
     
 0.627
CRE_17067
Uncharacterized protein.
     
 0.627
Cre-sdn-1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.581
Cre-clec-78
CRE-CLEC-78 protein.
    
  0.575
CRE_27800
Uncharacterized protein.
    
  0.575
CRE_27801
Uncharacterized protein.
    
  0.575
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.