STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_05363Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
CRE_07521
Uncharacterized protein.
   
  
 0.954
Cre-grl-5
CRE-GRL-5 protein.
   
    0.902
CRE_21866
Uncharacterized protein.
   
  
 0.724
CRE_00347
Uncharacterized protein.
   
  
 0.716
CRE_00675
Uncharacterized protein.
   
  
 0.715
CRE_31379
Uncharacterized protein.
   
  
 0.692
CRE_17077
Uncharacterized protein.
   
  
 0.690
CRE_30863
Lipase_3 domain-containing protein.
   
  
 0.678
Cre-mlt-9
CRE-MLT-9 protein.
   
  
 0.569
CRE_01651
Uncharacterized protein.
      
 0.550
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.