STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRE_15260N-terminal Ras-GEF domain-containing protein. (129 aa)    
Predicted Functional Partners:
Cre-pxf-1
CRE-PXF-1 protein.
    
  0.707
Cre-sos-1
CRE-SOS-1 protein.
   
 0.701
Cre-let-60
CRE-LET-60 protein.
     
 0.652
Cre-ral-1
CRE-RAL-1 protein.
     
 0.652
Cre-drn-1
CRE-DRN-1 protein.
     
 0.624
Cre-rap-2
CRE-RAP-2 protein.
     
 0.624
CRE_00742
Uncharacterized protein.
    
 0.614
Cre-rgef-1
CRE-RGEF-1 protein.
    
 0.614
CRE_29240
Uncharacterized protein.
    
 0.614
Cre-ssr-2
CRE-SSR-2 protein.
   
 
 0.609
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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