STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cre-pos-1CRE-POS-1 protein. (261 aa)    
Predicted Functional Partners:
Cre-xrn-1
5'-3' exoribonuclease 1.
    
 0.858
CRE_26500
Uncharacterized protein.
   
  0.851
Cre-exos-8
CRE-EXOS-8 protein.
   
  0.849
Cre-dcap-1
CRE-DCAP-1 protein.
    
 0.763
Cre-ftt-2
CRE-FTT-2 protein; Belongs to the 14-3-3 family.
   
 0.754
Cre-par-5
CRE-PAR-5 protein; Belongs to the 14-3-3 family.
   
 0.754
Cre-dcap-2
CRE-DCAP-2 protein.
   
 0.749
CRE_31643
Uncharacterized protein.
   
 0.749
Cre-mex-3
CRE-MEX-3 protein.
   
 
 0.731
Cre-akt-1
Non-specific serine/threonine protein kinase.
    
 0.708
Your Current Organism:
Caenorhabditis remanei
NCBI taxonomy Id: 31234
Other names: C. remanei, Caenorhabditis vulgaris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.